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  5. Lfl_g06566

Lfl_g06566 (ARP4, ATARP4)


Aliases : ARP4, ATARP4

Description : component *(ARP4) of SWR1 chromatin remodeling complex & original description: none


Gene families : OG0003946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06566

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00032330 ARP4, ATARP4,... Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aop_g01735 ARP4, ATARP4 component *(ARP4) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g02646 ARP4, ATARP4 component *(ARP4) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os08g04280.1 ARP4, ATARP4,... component ARP4 of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Nbi_g08168 ARP4, ATARP4 component *(ARP4) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e000084_P002 ARP4, ATARP4,... component ARP4 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 4 438
No external refs found!