Aliases : CSB3, CLB4, GCPE, HDS, ISPG
Description : 4-hydroxy-3-methylbut-2-enyl diphosphate synthase & original description: none
Gene families : OG0004404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004404_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00175p00057810 | CSB3, CLB4,... | Secondary metabolism.terpenoids.methylerythritol... | 0.04 | OrthoFinder output from all 47 species | |
AT5G60600 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.07 | OrthoFinder output from all 47 species | |
Aop_g14403 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0155.g053656 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.07 | OrthoFinder output from all 47 species | |
Cba_g71707 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g490350 | CSB3, CLB4,... | Secondary metabolism.terpenoids.methylerythritol... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g01725 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g07326 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025182001 | CSB3, CLB4,... | Secondary metabolism.terpenoids.methylerythritol... | 0.03 | OrthoFinder output from all 47 species | |
Gb_01895 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g39160.1 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.03 | OrthoFinder output from all 47 species | |
Len_g16087 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.03 | OrthoFinder output from all 47 species | |
Mp5g09870.1 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g10591 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g09734 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.04 | OrthoFinder output from all 47 species | |
Smo149035 | CSB3, CLB4,... | Secondary metabolism.terpenoids.methylerythritol... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g02819 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015046_P001 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016114 | terpenoid biosynthetic process | IEA | Interproscan |
MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004588 | IspG_bac-typ | 97 | 738 |
No external refs found! |