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  5. Lfl_g04215

Lfl_g04215


Description : not classified & original description: none


Gene families : OG0001201 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001201_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04215

Target Alias Description ECC score Gene Family Method Actions
Aev_g03343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031099 No alias not classified & original description: CDS=72-1049 0.01 OrthoFinder output from all 47 species
Azfi_s0054.g033791 No alias not classified & original description: CDS=1-1416 0.03 OrthoFinder output from all 47 species
Ceric.17G064000.1 Ceric.17G064000 not classified & original description: pacid=50617307... 0.03 OrthoFinder output from all 47 species
Dcu_g07087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g18970.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g24152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44921 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!