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  5. Lfl_g03930

Lfl_g03930 (LPA1)


Aliases : LPA1

Description : protein involved in PS-II assembly *(LPA1) & original description: none


Gene families : OG0007503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03930
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00200960 LPA1,... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT1G02910 LPA1 tetratricopeptide repeat (TPR)-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g09161 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Als_g14081 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g07881 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0301.g063734 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z061600.1 LPA1, Ceric.1Z061600 protein involved in PS-II assembly *(LPA1) & original... 0.1 OrthoFinder output from all 47 species
Cre10.g430150 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Dcu_g02841 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g15605 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01027972001 LPA1 Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
LOC_Os01g25600.1 LPA1, LOC_Os01g25600 LPA1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
MA_10428940g0010 LPA1 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_8804338g0010 LPA1 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Ore_g20376 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g08072 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g33137 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017935 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g14405 No alias protein involved in PS-II assembly *(LPA1) & original... 0.05 OrthoFinder output from all 47 species
Sam_g50149 No alias protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Smo134250 LPA1 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Spa_g09685 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e017629_P003 LPA1, Zm00001e017629 LPA1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 176 252
No external refs found!