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  5. Ala_g33204

Ala_g33204


Description : not classified & original description: none


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g33204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g103366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g095960.3.1 Solyc12g095960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014452_P001 Zm00001e014452 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029163_P001 Zm00001e029163 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 381 445
IPR004088 KH_dom_type_1 286 351
No external refs found!