Aliases : GTB1
Description : component *(SPT6) of SPT6-IWS1 transcription elongation complex & original description: none
Gene families : OG0001807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001807_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ala_g25347 | |
Cluster | HCCA: Cluster_92 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G63210 | No alias | Transcription elongation factor Spt6 | 0.03 | OrthoFinder output from all 47 species | |
AT1G65440 | GTB1 | global transcription factor group B1 | 0.1 | OrthoFinder output from all 47 species | |
Adi_g055496 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.08 | OrthoFinder output from all 47 species | |
Adi_g060511 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g43821 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.07 | OrthoFinder output from all 47 species | |
Als_g61446 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.06 | OrthoFinder output from all 47 species | |
Aob_g17694 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.06 | OrthoFinder output from all 47 species | |
Aob_g20381 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.07 | OrthoFinder output from all 47 species | |
Aop_g31491 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.08 | OrthoFinder output from all 47 species | |
Azfi_s0351.g066576 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.21G005900.1 | GTB1, Ceric.21G005900 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.30G057400.1 | Ceric.30G057400 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001486.8 | GTB1 | Chromatin organisation.histone chaperone... | 0.03 | OrthoFinder output from all 47 species | |
Cre09.g403182 | GTB1 | Chromatin organisation.histone chaperone... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g22241 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g14255 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.15 | OrthoFinder output from all 47 species | |
Dde_g17217 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01012381001 | GTB1 | Chromatin organisation.histone chaperone... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01025815001 | GTB1 | Chromatin organisation.histone chaperone... | 0.06 | OrthoFinder output from all 47 species | |
Gb_29261 | GTB1 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os05g41510.1 | GTB1, LOC_Os05g41510 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.05 | OrthoFinder output from all 47 species | |
Len_g19196 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.1 | OrthoFinder output from all 47 species | |
Len_g21328 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05758 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.11 | OrthoFinder output from all 47 species | |
MA_13648g0020 | GTB1 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.06 | OrthoFinder output from all 47 species | |
Mp2g25720.1 | GTB1 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.08 | OrthoFinder output from all 47 species | |
Msp_g42177 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g43712 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.1 | OrthoFinder output from all 47 species | |
Nbi_g05486 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.06 | OrthoFinder output from all 47 species | |
Ore_g08934 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.08 | OrthoFinder output from all 47 species | |
Pir_g01697 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g03432 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g31322 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0238.g026586 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g13993 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.07 | OrthoFinder output from all 47 species | |
Smo164675 | GTB1 | Chromatin organisation.histone chaperone... | 0.11 | OrthoFinder output from all 47 species | |
Solyc10g081020.2.1 | GTB1, Solyc10g081020 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g16432 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.1 | OrthoFinder output from all 47 species | |
Tin_g02913 | GTB1 | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.08 | OrthoFinder output from all 47 species | |
Tin_g21814 | No alias | component *(SPT6) of SPT6-IWS1 transcription elongation... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032018_P003 | GTB1, Zm00001e032018 | histone chaperone (SPT6). component SPT6 of SPT6-IWS1... | 0.11 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006473 | protein acetylation | IEP | HCCA |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016573 | histone acetylation | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042393 | histone binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043543 | protein acylation | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No external refs found! |