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  4. Sequence
  5. Ala_g21555

Ala_g21555


Description : not classified & original description: none


Gene families : OG0000151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000151_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g21555
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Aop_g10808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g44044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009538 No alias not classified & original description: CDS=1-651 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012149 No alias not classified & original description: CDS=1-1218 0.03 OrthoFinder output from all 47 species
Spa_g24408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!