Aliases : SRCAP, PIE1, chr13
Description : not classified & original description: none
Gene families : OG0002986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ala_g21115 | |
Cluster | HCCA: Cluster_92 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00085p00089520 | SRCAP, PIE1,... | Chromatin organisation.chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
AT3G12810 | SRCAP, PIE1, chr13 | SNF2 domain-containing protein / helicase... | 0.09 | OrthoFinder output from all 47 species | |
Adi_g046504 | SRCAP, PIE1, chr13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g086891 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
Aev_g17049 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
Als_g04504 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.1 | OrthoFinder output from all 47 species | |
Als_g11978 | SRCAP, PIE1, chr13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g13991 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene00837.t1 | SRCAP, PIE1,... | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.22G011100.1 | SRCAP, PIE1,... | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.12 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000194.26 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.03 | OrthoFinder output from all 47 species | |
Cre14.g618860 | SRCAP, PIE1, chr13 | Chromatin organisation.chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g08326 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.12 | OrthoFinder output from all 47 species | |
Dcu_g39491 | SRCAP, PIE1, chr13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g22840 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01033511001 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.12 | OrthoFinder output from all 47 species | |
Gb_04358 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g46450.2 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.09 | OrthoFinder output from all 47 species | |
Len_g28435 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
MA_424432g0010 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.12 | OrthoFinder output from all 47 species | |
MA_64269g0010 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.08 | OrthoFinder output from all 47 species | |
MA_9456975g0010 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.06 | OrthoFinder output from all 47 species | |
Mp7g15670.1 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.07 | OrthoFinder output from all 47 species | |
Msp_g15065 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g13998 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g11854 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g56964 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.07 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0012.g005513 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g11626 | No alias | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g063210.3.1 | SRCAP, PIE1,... | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.06 | OrthoFinder output from all 47 species | |
Solyc03g063220.2.1 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.16 | OrthoFinder output from all 47 species | |
Spa_g09110 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.08 | OrthoFinder output from all 47 species | |
Tin_g20443 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromaTin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015483_P001 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.1 | OrthoFinder output from all 47 species | |
Zm00001e023267_P001 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.09 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0017069 | snRNA binding | IEP | HCCA |
MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR014012 | HSA_dom | 26 | 92 |
No external refs found! |