- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ATDRH1, DRH1
Description : not classified & original description: none
Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G06480 | No alias | DEAD box RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036389 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074120 | ATDRH1, DRH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g42061 | ATDRH1, DRH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g33054 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene63146.t2 | ATDRH1, DRH1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0020.g015531 | ATDRH1, DRH1 | not classified & original description: CDS=33-2831 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10365 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G044900.1 | ATDRH1, DRH1,... | not classified & original description: pacid=50619771... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G038500.1 | Ceric.21G038500 | regulatory RNA helicase *(RH20/RH30) of virus... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.27G030300.1 | ATDRH1, DRH1,... | not classified & original description: pacid=50605657... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g12670 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10539 | ATDRH1, DRH1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g17414 | ATDRH1, DRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016847001 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10302 | ATDRH1, DRH1 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g10050.2 | LOC_Os01g10050 | pre-mRNA splicing regulator (DDX5) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g46240.1 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17375 | ATDRH1, DRH1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g13618 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.03 | OrthoFinder output from all 47 species | |
| MA_19015g0010 | No alias | pre-mRNA splicing regulator (DDX5) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g07940.1 | No alias | pre-mRNA splicing regulator (DDX5) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g39551 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38769 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02786 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08678 | ATDRH1, DRH1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g19068 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g12189 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14840 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g057760.4.1 | Solyc01g057760 | DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g112350.4.1 | Solyc03g112350 | pre-mRNA splicing regulator (DDX5) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g044860.3.1 | Solyc12g044860 | DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56211 | ATDRH1, DRH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e011376_P001 | Zm00001e011376 | ATP-dependent RNA helicase-like protein DB10... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016546_P001 | Zm00001e016546 | pre-mRNA splicing regulator (DDX5) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020727_P006 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020972_P005 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027719_P003 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| No external refs found! |