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Aliases : CHUP1
Description : motility factor *(CHUP) & original description: none
Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g13466 | |
| Cluster | HCCA: Cluster_89 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00147p00070270 | CHUP1,... | Cytoskeleton.cp-actin-dependent plastid movement.CHUP... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G25690 | CHUP1 | Hydroxyproline-rich glycoprotein family protein | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g05340 | CHUP1 | motility factor *(CHUP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g13667 | CHUP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03546 | CHUP1 | motility factor *(CHUP) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g11040 | CHUP1 | motility factor *(CHUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene03133.t1 | CHUP1, Aspi01Gene03133 | motility factor *(CHUP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.25G018000.1 | CHUP1, Ceric.25G018000 | motility factor *(CHUP) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g36487 | CHUP1 | motility factor *(CHUP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g37098 | CHUP1 | motility factor *(CHUP) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g48663 | CHUP1 | motility factor *(CHUP) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01011966001 | CHUP1 | Cytoskeleton.cp-actin-dependent plastid movement.CHUP... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_27995 | CHUP1 | motility factor (CHUP) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os11g01439.1 | CHUP1, LOC_Os11g01439 | motility factor (CHUP) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g01449.1 | CHUP1, LOC_Os12g01449 | motility factor (CHUP) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04239 | CHUP1 | motility factor *(CHUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15601 | CHUP1 | motility factor *(CHUP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g04962 | CHUP1 | motility factor *(CHUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27545 | CHUP1 | motility factor *(CHUP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g17440 | CHUP1 | motility factor *(CHUP) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g33216 | CHUP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12610 | CHUP1 | motility factor *(CHUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02408 | CHUP1 | motility factor *(CHUP) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g09064 | No alias | motility factor *(CHUP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35111 | No alias | motility factor *(CHUP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo438117 | CHUP1 | Cytoskeleton.cp-actin-dependent plastid movement.CHUP... | 0.05 | OrthoFinder output from all 47 species | |
| Smo438203 | CHUP1 | Cytoskeleton.cp-actin-dependent plastid movement.CHUP... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g009930.3.1 | CHUP1, Solyc05g009930 | motility factor (CHUP) | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g25235 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032505_P001 | CHUP1, Zm00001e032505 | motility factor (CHUP) | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |