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Description : ribosome biogenesis factor *(CRASS) & original description: none
Gene families : OG0007938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007938_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g13367 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G14910 | No alias | Heavy metal transport/detoxification superfamily protein | 0.13 | OrthoFinder output from all 47 species | |
| Aev_g02821 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g04787 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g06536 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060247 | No alias | ribosome biogenesis factor *(CRASS) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.01G033000.1 | Ceric.01G033000 | ribosome biogenesis factor *(CRASS) & original... | 0.13 | OrthoFinder output from all 47 species | |
| Dac_g12212 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36209 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dde_g11519 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g04247 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g05290 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01032527001 | No alias | No description available | 0.1 | OrthoFinder output from all 47 species | |
| Gb_22864 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g27100.1 | LOC_Os05g27100 | ribosome biogenesis factor (CRASS) | 0.1 | OrthoFinder output from all 47 species | |
| Len_g14822 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g37391 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| MA_59576g0010 | No alias | ribosome biogenesis factor (CRASS) | 0.1 | OrthoFinder output from all 47 species | |
| Mp6g04290.1 | No alias | ribosome biogenesis factor (CRASS) | 0.15 | OrthoFinder output from all 47 species | |
| Msp_g44058 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g44614 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g05841 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Pp3c1_25290V3.1 | Pp3c1_25290 | Heavy metal transport/detoxification superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00577 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0180.g024792 | No alias | ribosome biogenesis factor *(CRASS) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g13302 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13303 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g087150.3.1 | Solyc02g087150 | ribosome biogenesis factor (CRASS) | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g10440 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e031534_P001 | Zm00001e031534 | ribosome biogenesis factor (CRASS) | 0.15 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |