Ala_g12642 (GN, EMB30, VAN7)

Aliases : GN, EMB30, VAN7

Description : ARF-GTPase guanyl-nucleotide exchange factor *(GBF) & original description: none

Gene families : OG0002212 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002212_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g12642
Cluster	HCCA: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method
AT5G39500	GNL1, ERMO1	GNOM-like 1	0.05	OrthoFinder output from all 47 species
Adi_g016413	GN, EMB30, VAN7	ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &...	0.05	OrthoFinder output from all 47 species
Adi_g020078	GN, EMB30, VAN7	ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &...	0.04	OrthoFinder output from all 47 species
Aev_g23918	GN, EMB30, VAN7	ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &...	0.02	OrthoFinder output from all 47 species
Aob_g06750	GN, EMB30, VAN7	ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &...	0.03	OrthoFinder output from all 47 species
Aop_g09287	GN, EMB30, VAN7	ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0094.g043397	GN, EMB30, VAN7	ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &...	0.05	OrthoFinder output from all 47 species
Ceric.15G051500.1	GN, EMB30, VAN7,...	ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000241.27	No alias	ARF guanine-nucleotide exchange factor GNL2...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000317.26	GN, EMB30, VAN7	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
Cre07.g334100	GN, EMB30, VAN7	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
GSVIVT01013109001	GN, EMB30, VAN7	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.06	OrthoFinder output from all 47 species
Gb_01979	GN, EMB30, VAN7	GBF-type ARF-GTPase guanyl-nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
LOC_Os02g22090.1	GN, EMB30, VAN7,...	GBF-type ARF-GTPase guanyl-nucleotide exchange factor	0.06	OrthoFinder output from all 47 species
LOC_Os03g46330.1	GN, EMB30, VAN7,...	GBF-type ARF-GTPase guanyl-nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
MA_10434215g0010	GN, EMB30, VAN7	GBF-type ARF-GTPase guanyl-nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
MA_50146g0010	GN, EMB30, VAN7	GBF-type ARF-GTPase guanyl-nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
Mp3g25100.1	GN, EMB30, VAN7	GBF-type ARF-GTPase guanyl-nucleotide exchange factor	0.05	OrthoFinder output from all 47 species
Ore_g06949	GN, EMB30, VAN7	ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &...	0.03	OrthoFinder output from all 47 species
Pir_g11845	GN, EMB30, VAN7	ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &...	0.03	OrthoFinder output from all 47 species
Solyc05g013040.3.1	GN, EMB30, VAN7,...	GBF-type ARF-GTPase guanyl-nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
Zm00001e002340_P001	GN, EMB30, VAN7,...	GBF-type ARF-GTPase guanyl-nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
Zm00001e037882_P001	GN, EMB30, VAN7,...	GBF-type ARF-GTPase guanyl-nucleotide exchange factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0032012	regulation of ARF protein signal transduction	IEA	Interproscan
BP	GO:0046578	regulation of Ras protein signal transduction	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051056	regulation of small GTPase mediated signal transduction	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0005049	nuclear export signal receptor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032691	Mon2/Sec7/BIG1-like_HUS	308	466
IPR000904	Sec7_dom	556	739

External Links

No external refs found!

Ala_g12642 (GN, EMB30, VAN7)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation