- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : HUA2
Description : HUA2-type transcription factor & original description: none
Gene families : OG0001723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001723_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g12546 | |
| Cluster | HCCA: Cluster_92 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00079800 | HUA2,... | RNA biosynthesis.transcriptional activation.HUA2... | 0.13 | OrthoFinder output from all 47 species | |
| AT3G63070 | No alias | Tudor/PWWP/MBT domain-containing protein | 0.14 | OrthoFinder output from all 47 species | |
| AT5G23150 | HUA2 | Tudor/PWWP/MBT domain-containing protein | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g019417 | HUA2 | HUA2-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g055484 | HUA2 | HUA2-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g055827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055828 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077952 | HUA2 | HUA2-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g113316 | HUA2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g11061 | HUA2 | HUA2-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g29120 | HUA2 | HUA2-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g55257 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22454 | HUA2 | HUA2-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20186 | HUA2 | HUA2-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene06214.t1 | HUA2, Aspi01Gene06214 | HUA2-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene42433.t1 | Aspi01Gene42433 | HUA2-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene42435.t2 | HUA2, Aspi01Gene42435 | HUA2-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009802 | HUA2 | HUA2-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.33G048700.1 | HUA2, Ceric.33G048700 | HUA2-type transcription factor & original description:... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.36G034600.1 | HUA2, Ceric.36G034600 | HUA2-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g14860 | HUA2 | HUA2-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g13274 | HUA2 | HUA2-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21799 | HUA2 | HUA2-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g25712 | HUA2 | HUA2-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01011100001 | No alias | RNA biosynthesis.transcriptional activation.HUA2... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01012049001 | HUA2 | RNA biosynthesis.transcriptional activation.HUA2... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_39860 | HUA2 | transcription factor (HUA2) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os03g24339.1 | LOC_Os03g24339 | transcription factor (HUA2) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g46180.1 | LOC_Os07g46180 | transcription factor (HUA2) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g01054.2 | HUA2, LOC_Os08g01054 | transcription factor (HUA2) | 0.09 | OrthoFinder output from all 47 species | |
| Len_g21971 | HUA2 | HUA2-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Len_g53945 | HUA2 | HUA2-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g04290 | HUA2 | HUA2-type transcription factor & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| MA_3338g0010 | No alias | transcription factor (HUA2) | 0.07 | OrthoFinder output from all 47 species | |
| MA_9359526g0010 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Mp8g15320.1 | HUA2 | transcription factor (HUA2) | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g27240 | HUA2 | HUA2-type transcription factor & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Nbi_g08516 | HUA2 | HUA2-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36626 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g16391 | HUA2 | HUA2-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g13358 | HUA2 | HUA2-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g30186 | No alias | HUA2-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g51385 | No alias | HUA2-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo404055 | HUA2 | RNA biosynthesis.transcriptional activation.HUA2... | 0.06 | OrthoFinder output from all 47 species | |
| Smo414202 | HUA2 | RNA biosynthesis.transcriptional activation.HUA2... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g014115.1.1 | HUA2, Solyc02g014115 | transcription factor (HUA2) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g014130.3.1 | HUA2, Solyc02g014130 | ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc09g064840.4.1 | Solyc09g064840 | transcription factor (HUA2) | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g08440 | HUA2 | HUA2-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10511 | HUA2 | HUA2-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g18277 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g11569 | HUA2 | HUA2-type transcription factor & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e001720_P002 | Zm00001e001720 | transcription factor (HUA2) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e024276_P001 | HUA2, Zm00001e024276 | transcription factor (HUA2) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e029104_P001 | HUA2, Zm00001e029104 | transcription factor (HUA2) | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e038169_P004 | Zm00001e038169 | transcription factor (HUA2) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| No external refs found! |