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  5. Ala_g11619

Ala_g11619


Description : prolyl hydroxylase & original description: none


Gene families : OG0000256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11619

Target Alias Description ECC score Gene Family Method Actions
AT3G06300 AT-P4H-2 P4H isoform 2 0.03 OrthoFinder output from all 47 species
AT4G33910 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 OrthoFinder output from all 47 species
AT5G66060 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 OrthoFinder output from all 47 species
Ehy_g19230 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028915001 No alias Protein modification.hydroxylation.prolyl hydroxylase 0.03 OrthoFinder output from all 47 species
Ore_g05640 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018724 AT-P4H-1 prolyl hydroxylase & original description: CDS=168-899 0.05 OrthoFinder output from all 47 species
Spa_g04988 No alias prolyl hydroxylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012813_P001 Zm00001e012813 prolyl hydroxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR044862 Pro_4_hyd_alph_FE2OG_OXY 146 261
IPR003582 ShKT_dom 274 315
No external refs found!