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  5. Ala_g11567

Ala_g11567


Description : DNA primase and helicase *(TWINKLE) & original description: none


Gene families : OG0002154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11567

Target Alias Description ECC score Gene Family Method Actions
Adi_g023450 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008778001 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01021728001 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.04 OrthoFinder output from all 47 species
MA_21134g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g35190 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11362 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57752 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.04 OrthoFinder output from all 47 species
Smo164801 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006171 TOPRIM_domain 283 376
No external refs found!