Ala_g11416

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g11416

Target	Alias	Description	ECC score	Gene Family Method
Aev_g11762	No alias	ornithine decarboxylase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g03505	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g35242	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28446.t1	Aspi01Gene28446	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g15212	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g78784	SAMDC	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g01538	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g25624	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g07578	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g32435	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g04665	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Solyc01g080380.4.1	SAMDC4, BUD2,...	S-adenosyl methionine decarboxylase	0.03	OrthoFinder output from all 47 species
Solyc02g089610.2.1	Solyc02g089610	S-adenosyl methionine decarboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	Interproscan
BP	GO:0006576	biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	biogenic amine biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	12	415

External Links

No external refs found!

Ala_g11416

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation