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  5. Ala_g09720

Ala_g09720


Description : nucleocytoplasmic export karyopherin *(XPO7) & original description: none


Gene families : OG0003435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g09720
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Ceric.31G023600.1 Ceric.31G023600 nucleocytoplasmic export karyopherin *(XPO7) & original... 0.03 OrthoFinder output from all 47 species
Cre19.g751347 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Gb_33327 No alias XPO7 nucleocytoplasmic export karyopherin 0.03 OrthoFinder output from all 47 species
LOC_Os03g42050.1 LOC_Os03g42050 XPO7 nucleocytoplasmic export karyopherin 0.03 OrthoFinder output from all 47 species
Lfl_g05013 No alias nucleocytoplasmic export karyopherin *(XPO7) & original... 0.05 OrthoFinder output from all 47 species
MA_10427428g0010 No alias XPO7 nucleocytoplasmic export karyopherin 0.04 OrthoFinder output from all 47 species
MA_20559g0010 No alias XPO7 nucleocytoplasmic export karyopherin 0.04 OrthoFinder output from all 47 species
Nbi_g02474 No alias nucleocytoplasmic export karyopherin *(XPO7) & original... 0.04 OrthoFinder output from all 47 species
Sam_g50433 No alias nucleocytoplasmic export karyopherin *(XPO7) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g056520.3.1 Solyc01g056520 XPO7 nucleocytoplasmic export karyopherin 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0031267 small GTPase binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 26 90
No external refs found!