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  5. Ala_g07415

Ala_g07415 (VPS35B)


Aliases : VPS35B

Description : component *(VPS35) of Retromer protein recycling complex & original description: none


Gene families : OG0003496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07415

Target Alias Description ECC score Gene Family Method Actions
AT2G17790 ZIP3, VPS35A VPS35 homolog A 0.03 OrthoFinder output from all 47 species
AT3G51310 VPS35C VPS35 homolog C 0.03 OrthoFinder output from all 47 species
Adi_g011699 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Aev_g16183 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Aop_g01821 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Ceric.32G026000.1 VPS35B, Ceric.32G026000 component *(VPS35) of Retromer protein recycling complex... 0.05 OrthoFinder output from all 47 species
Cre01.g029650 ZIP3, VPS35A Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Dcu_g44008 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.05 OrthoFinder output from all 47 species
Dde_g10908 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.05 OrthoFinder output from all 47 species
Ehy_g31751 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01009948001 VPS35B Vesicle trafficking.endomembrane trafficking.protein... 0.05 OrthoFinder output from all 47 species
Lfl_g08397 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.04 OrthoFinder output from all 47 species
Msp_g00699 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Solyc02g083560.3.1 ZIP3, VPS35A,... component VPS35 of Retromer protein recycling complex 0.05 OrthoFinder output from all 47 species
Solyc03g033400.4.1 ZIP3, VPS35A,... component VPS35 of Retromer protein recycling complex 0.03 OrthoFinder output from all 47 species
Spa_g15075 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Tin_g02135 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Zm00001e006031_P002 VPS35B, Zm00001e006031 component VPS35 of Retromer protein recycling complex 0.06 OrthoFinder output from all 47 species
Zm00001e011849_P003 VPS35B, Zm00001e011849 component VPS35 of Retromer protein recycling complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0030906 retromer, cargo-selective complex IEA Interproscan
BP GO:0042147 retrograde transport, endosome to Golgi IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR005378 Vps35 18 754
No external refs found!