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  5. Ala_g07082

Ala_g07082


Description : not classified & original description: none


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07082

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00133450 BBD1, ATBBD1,... Bifunctional nuclease 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G19660 No alias Wound-responsive family protein 0.04 OrthoFinder output from all 47 species
AT1G75380 BBD1, ATBBD1 bifunctional nuclease in basal defense response 1 0.02 OrthoFinder output from all 47 species
Als_g02366 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g15641 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09530 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.09G019300.1 BBD1, ATBBD1,... not classified & original description: pacid=50586572... 0.05 OrthoFinder output from all 47 species
Ceric.22G026600.1 Ceric.22G026600 not classified & original description: pacid=50614244... 0.03 OrthoFinder output from all 47 species
Dac_g24289 BBD1, ATBBD1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g21453 BBD1, ATBBD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009760001 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g50622.1 LOC_Os01g50622 Bifunctional nuclease 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os08g26870.1 LOC_Os08g26870 Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Lfl_g03796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31557 BBD1, ATBBD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05274 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g11428 BBD1, ATBBD1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g33906 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02503 BBD1, ATBBD1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g09798 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05101 BBD1, ATBBD1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g29925 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018013_P001 Zm00001e018013 Bifunctional nuclease 1 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 125 235
No external refs found!