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  5. Ala_g02718

Ala_g02718 (PA200)


Aliases : PA200

Description : proteasome core particle assembly factor *(PA200) & original description: none


Gene families : OG0001792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001792_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02718
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Adi_g001200 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Als_g22319 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Aob_g32788 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene50961.t1 PA200, Aspi01Gene50961 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene62923.t1 PA200, Aspi01Gene62923 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Ceric.17G047600.1 PA200, Ceric.17G047600 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Dde_g10206 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Gb_01100 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_28179 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_28180 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_28181 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_28182 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g16204 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
MA_10429645g0010 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433922g0010 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_51487g0010 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g17276 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016437 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Sam_g50553 No alias proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Smo236562 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e031009_P002 PA200, Zm00001e031009 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032430 Blm10_mid 528 804
IPR032430 Blm10_mid 316 528
IPR021843 PSME4_C 1752 1838
No external refs found!