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Description : regulatory factor *(RIQ) of thylakoid grana stacking & original description: none
Gene families : OG0004759 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004759_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g00963 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00154p00066950 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT5G08050 | No alias | Protein of unknown function (DUF1118) | 0.13 | OrthoFinder output from all 47 species | |
| Adi_g021665 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g046840 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g10172 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04124 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g09320 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09516 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.12 | OrthoFinder output from all 47 species | |
| Aspi01Gene44811.t1 | Aspi01Gene44811 | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026304 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g04313 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G020000.1 | Ceric.34G020000 | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.12 | OrthoFinder output from all 47 species | |
| Dac_g00528 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g47527 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g01981 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.1 | OrthoFinder output from all 47 species | |
| Ehy_g02092 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008106001 | No alias | No description available | 0.13 | OrthoFinder output from all 47 species | |
| Gb_03565 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g38640.1 | LOC_Os12g38640 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Len_g11447 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.12 | OrthoFinder output from all 47 species | |
| Len_g44742 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g03718 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.12 | OrthoFinder output from all 47 species | |
| MA_114154g0010 | No alias | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| Mp1g29140.1 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g08411 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.09 | OrthoFinder output from all 47 species | |
| Nbi_g08483 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g09667 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.11 | OrthoFinder output from all 47 species | |
| Pir_g59758 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g10046 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g30016 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0091.g018867 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g23850 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.07 | OrthoFinder output from all 47 species | |
| Smo415599 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g115020.3.1 | Solyc03g115020 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03718 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g04667 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g15216 | No alias | regulatory factor *(RIQ) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e002989_P001 | Zm00001e002989 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015252 | proton channel activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009500 | DUF1118 | 90 | 202 |
| No external refs found! |