Msp_g38797 (WRKY48, ATWRKY48)

Aliases : WRKY48, ATWRKY48

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g38797
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00228580	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G18860	WRKY61, ATWRKY61	WRKY DNA-binding protein 61	0.02	OrthoFinder output from all 47 species
AT1G66600	ABO3, WRKY63, ATWRKY63	ABA overly sensitive mutant 3	0.03	OrthoFinder output from all 47 species
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.02	OrthoFinder output from all 47 species
Adi_g039781	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g01407	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g19223	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g37874	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene06724.t1	ATWRKY58,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0065.g035963	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: CDS=1-801	0.03	OrthoFinder output from all 47 species
Ceric.13G048400.1	WRKY3, Ceric.13G048400	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.20G087100.1	Ceric.20G087100	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.24G019100.1	Ceric.24G019100	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.25G052100.1	WRKY42,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.35G059800.1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g08845	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g20453	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g18841	WRKY62, ATWRKY62	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g62510.1	ATWRKY57,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g09020.1	ATWRKY50,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os07g48260.1	WRKY54,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os09g16510.1	WRKY46,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os11g29870.1	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Lfl_g09240	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10434651g0010	WRKY4	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_212937g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_558583g0010	WRKY31, ATWRKY31	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp1g08960.1	WRKY53, ATWRKY53	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp1g24950.1	ATWRKY64, WRKY64	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Mp4g00180.1	WRKY6, ATWRKY6	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp6g16800.1	WRKY48, ATWRKY48	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Mp7g06550.1	ATWRKY57, WRKY57	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Msp_g35939	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g25880	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g09440	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g38149	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g50657	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Smo66769	WRKY4	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
Solyc01g104550.3.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc05g007110.2.1	WRKY61,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc05g053380.4.1	WRKY48,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc06g070990.3.1	WRKY61,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g37337	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g11625	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g19874	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e017439_P001	AtWRKY47,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027989_P001	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e028011_P002	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e033860_P001	ATWRKY30,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e036514_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e040369_P001	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	115	171

External Links

No external refs found!

Msp_g38797 (WRKY48, ATWRKY48)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation