Msp_g36602 (ATWRKY24, WRKY24)

Aliases : ATWRKY24, WRKY24

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g36602
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00181570	WRKY6, ATWRKY6,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G62300	WRKY6, ATWRKY6	WRKY family transcription factor	0.02	OrthoFinder output from all 47 species
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.02	OrthoFinder output from all 47 species
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.03	OrthoFinder output from all 47 species
AT5G41570	ATWRKY24, WRKY24	WRKY DNA-binding protein 24	0.02	OrthoFinder output from all 47 species
Adi_g041253	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20940	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28735	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g46837	WRKY3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g16136	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g26276	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene39448.t1	WRKY3, Aspi01Gene39448	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g19526	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.28G003100.1	WRKY31,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.29G026500.1	Ceric.29G026500	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g00870	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g27869	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g28011	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g18304	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g31692	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008046001	WRKY72, ATWRKY72	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01010525001	WRKY75, ATWRKY75	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01021397001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01025562001	WRKY44, TTG2,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01026969001	ATWRKY24, WRKY24	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01028244001	AtWRKY47, WRKY47	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01034148001	WRKY49, ATWRKY49	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
GSVIVT01037686001	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
Gb_39366	WRKY31, ATWRKY31	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g09080.1	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g60600.1	WRKY54,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os01g61080.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g45230.1	WRKY43,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os06g44010.1	WRKY18,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Lfl_g29076	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_47052g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_83250g0010	WRKY6, ATWRKY6	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Ore_g11298	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g23649	ATWRKY70, WRKY70	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g40441	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63011	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c22_12880V3.1	ATWRKY50,...	WRKY DNA-binding protein 48	0.02	OrthoFinder output from all 47 species
Sam_g18765	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo29146	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Solyc05g007110.2.1	WRKY61,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc08g081630.2.1	WRKY56,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g03864	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g19666	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g22896	ABO3, WRKY63, ATWRKY63	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37337	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g16789	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g17891	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e016343_P002	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e018502_P001	WRKY49,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e020410_P001	WRKY28,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Zm00001e025096_P001	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e025937_P001	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027460_P001	WRKY56,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027804_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e030443_P001	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e032189_P001	WRKY56,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e032260_P001	ATWRKY50,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e040032_P002	WRKY44, TTG2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	439	495

External Links

No external refs found!

Msp_g36602 (ATWRKY24, WRKY24)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation