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Heatmap: Cluster_28 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
2.77 -6.9 - -5.55 -3.85 -4.02 -6.36
2.78 - -5.6 - -3.34 -9.25 -9.87
2.48 -3.1 -1.47 - -1.6 -0.74 -
Msp_g06374 (KJK)
 2.66 -2.6 -2.58 - -1.48 - -
2.57 -3.58 -2.52 -4.12 -2.06 -1.95 -2.1
2.26 -1.24 0.05 -1.38 -2.49 -2.41 -
1.88 -0.67 0.14 -1.52 -0.95 -1.37 -1.58
2.54 -5.17 -1.57 -7.74 -1.97 -2.67 -1.31
Msp_g12630 (SWEET7)
 2.61 - - - -1.3 -1.18 -4.56
Msp_g13259 (WBC27)
 1.85 -0.81 -1.13 -0.77 -0.68 -0.7 -0.89
2.32 -1.42 -0.18 -1.98 -4.59 -5.55 -1.22
2.71 -2.94 -4.18 -2.81 -5.38 -3.71 -7.2
Msp_g18588 (CYP94D1)
 2.14 -0.78 0.37 -1.49 -3.62 -3.66 -2.38
2.27 -1.14 -2.25 -1.61 -1.11 -1.46 -1.46
2.5 -4.32 -0.17 -6.49 -1.87 -3.58 -5.09
1.66 -0.74 -0.3 -0.82 -0.81 -0.8 -0.48
2.04 -1.64 0.17 -1.25 -2.09 -2.17 -0.8
Msp_g26300 (DSO)
 2.35 -2.04 -0.6 -2.27 -2.0 -1.91 -1.92
2.46 -3.59 0.51 - - - -
2.43 -2.28 -1.07 -2.48 -2.16 -3.59 -1.14
1.64 -0.79 -0.15 -0.66 -0.29 -1.23 -0.96
2.62 - -6.92 - -2.0 -1.12 -2.97
2.8 - -6.69 - - -6.13 -
Msp_g31697 (DSO)
 2.08 -1.49 -1.0 -1.69 -1.11 -0.76 -0.83
2.51 -2.09 -1.69 -3.1 -3.0 -1.36 -3.03
2.69 - -3.33 -2.11 - -2.14 -
2.39 -2.56 -2.65 -1.1 -1.0 -1.11 -
2.64 - -1.66 - -3.33 -2.81 -2.28
2.62 - -4.4 -7.42 -2.54 -1.33 -2.18
2.53 -1.46 -1.89 -1.39 - - -2.22
Msp_g36602 (WRKY24)
 2.21 -2.1 0.11 -2.21 -4.64 -2.56 -0.65
2.51 -4.85 -1.92 -4.64 -4.15 -3.68 -0.26
Msp_g39017 (JAR1)
 2.33 -2.11 -0.46 -1.9 - - -0.46
2.39 -3.27 -0.81 - -3.24 -2.16 -0.43
2.66 - -2.41 - -1.33 -3.27 -
2.16 -1.3 0.3 -1.99 -2.15 -1.81 -2.95
2.72 - -1.33 - - -5.13 -
2.81 - - - - - -
2.81 - - - - - -
2.8 - -5.43 - - -11.12 -10.06
2.81 - - - - - -
2.66 -1.75 -1.94 -2.89 - - -
2.63 -4.0 -1.34 -3.85 -7.19 -3.1 -2.66
2.57 -8.02 0.03 -7.37 -7.25 -7.88 -
Msp_g40224 (TPD1)
 2.71 - -1.17 - - - -
2.68 -3.17 -2.04 -2.85 -5.04 -3.51 -
2.81 - - - - - -
Msp_g40394 (TET8)
 2.66 -3.12 - -5.19 -3.41 -2.97 -1.59
2.43 -1.93 -2.56 -3.73 -1.0 -1.24 -2.36
2.73 - - - - - -1.39
2.61 -3.46 -0.84 - -3.57 - -2.82
2.72 - - - - - -1.28
2.79 - - -5.06 - - -4.64
2.79 -6.29 -4.68 - - -5.13 -
2.81 - - - - - -
2.8 - -4.17 - - - -
2.79 - -4.09 - - -6.92 -
2.78 - -6.78 - -4.48 -3.86 -
2.59 -1.45 -4.45 -1.96 -3.18 - -2.2
2.79 -8.71 -5.51 - -5.35 -5.36 -8.08
2.29 - 0.42 -2.12 -1.66 -3.15 -3.22
2.71 - -1.14 - - - -
2.81 - - - - - -
2.81 - - - - - -
2.81 - - - - - -
2.69 -3.78 -3.08 - -5.03 -6.1 -1.78
2.61 -1.61 -3.64 -1.79 -3.93 -3.66 -4.04
2.52 -3.98 -0.4 -4.21 -3.04 -3.31 -2.47
2.64 - -3.11 -3.23 -2.18 -3.92 -1.86
2.64 - -5.47 -3.89 -2.54 -2.38 -1.77
2.66 -5.36 -2.08 - - - -1.32
2.79 -3.3 - - - - -
2.73 - - -6.45 -2.92 -2.46 -4.65
2.73 - -5.0 - -3.38 -2.11 -
2.73 - - - - -1.53 -
2.78 - - - -2.89 - -
2.5 -1.83 -2.88 -3.07 -2.0 -0.8 -
2.81 - - - - - -
2.77 - -2.41 - - - -
2.36 - -2.63 -1.44 -2.57 -1.38 -0.36
2.44 -3.43 -1.86 -2.46 -0.79 -1.43 -4.06
2.81 - - - - - -
2.81 - - - - - -
Msp_g42178 (LAC11)
 2.73 -4.17 -3.42 -4.36 -5.4 -4.75 -3.15
2.55 -3.5 -0.1 -3.25 -6.0 -6.12 -6.92
2.58 -4.73 -0.09 - - - -4.61
2.8 - -6.39 - - - -
2.73 -3.67 -2.23 -4.22 - - -4.99
2.8 - -7.44 - -6.19 -5.03 -
2.79 - - -3.48 - - -
2.78 - - - -3.33 -4.6 -
2.5 -4.0 -5.01 -4.08 -1.11 -1.09 -2.08
2.79 - -6.05 - -7.75 -6.73 -4.72
2.48 -4.14 0.1 -4.72 - -4.03 -2.4
Msp_g42891 (GLP10)
 2.81 - -7.0 - - - -
Msp_g42892 (GLP10)
 2.81 - - - - - -
Msp_g42905 (GLP10)
 2.81 - -8.01 - - -8.48 -
2.52 -5.29 -1.75 -2.58 -2.38 -1.45 -2.27
2.7 -4.03 -3.91 -5.04 -2.56 -3.35 -3.73
2.55 -2.84 - -2.62 -2.84 -0.86 -2.75
2.68 -2.15 -2.29 -2.58 - - -
Msp_g43018 (UNE14)
 2.72 - -5.93 - -4.38 -1.86 -4.17
2.28 -1.48 -1.24 -2.19 -1.47 -2.4 -0.74
2.65 -2.87 -2.99 - -2.69 -2.66 -2.58
2.8 -7.64 - -7.76 - -6.45 -
2.49 -2.93 0.09 -2.88 - -6.35 -4.79
2.78 -4.67 -4.64 - - -4.6 -
2.57 -1.26 -3.05 -1.12 -4.84 - -4.72
2.58 - -1.19 - -4.58 -2.35 -1.61
2.8 - - - - -5.84 -
2.81 - - - - - -
Msp_g43322 (SPL8)
 2.42 -5.06 0.18 -6.71 -1.39 -3.91 -5.88
Msp_g43445 (GH9B8)
 2.8 - -4.99 - - -6.65 -
2.47 -1.71 -1.29 -1.92 -5.2 -3.17 -1.5
2.8 - -6.92 - - -6.87 -
2.8 - -5.97 - - -7.85 -
2.8 -8.8 -6.47 - - - -
2.74 - -4.03 -5.09 - -4.89 -2.43
2.59 - - - -3.79 -0.99 -1.33
2.81 - - - - - -
2.8 - - - - - -4.68
2.8 - -4.8 - - -7.99 -
2.81 - -6.74 - - - -
2.81 -9.08 - - - - -
Msp_g44003 (QRT3)
 2.8 - -6.54 - -8.74 -6.78 -8.75
2.55 -7.0 -0.75 -6.07 -4.66 -2.7 -1.59
2.47 -1.82 -0.19 -3.05 - -3.34 -3.47
2.57 -2.92 -0.64 - - - -1.89
2.7 - - - -2.26 - -1.85
2.75 -6.63 -7.54 -5.57 -5.18 -5.95 -2.49
2.76 - -7.57 - -2.79 -4.11 -
2.72 -3.17 - -3.03 - -2.52 -
Msp_g44443 (CYP704B1)
 2.8 - -6.08 - - -6.4 -
2.76 -6.37 -5.81 -4.92 -8.86 -7.51 -2.8
2.8 - -7.19 -7.89 - - -8.83
2.81 - - - - - -
2.81 - -8.72 - - - -
2.81 - - - - - -
2.81 - - - - - -
2.43 -3.1 -0.13 -2.9 -2.48 -2.56 -3.23
2.8 - -6.2 -7.52 - -8.37 -5.93
2.33 -1.4 -0.64 -1.19 -2.06 -3.55 -2.56
2.66 - -0.56 - - - -
2.62 -5.25 -2.97 - -4.5 -2.19 -1.15
2.81 - - - - - -
Msp_g44696 (GL22)
 2.81 - - - - -7.8 -
2.55 - -2.69 -4.54 -3.6 -4.64 -0.3
2.8 - -6.12 - - -5.21 -7.27
2.73 -3.49 -3.78 -3.76 -6.19 -4.76 -4.05
Msp_g44922 (LBD20)
 2.78 - -4.77 - -6.74 -3.69 -
2.81 - - - - - -
2.8 -9.5 -5.95 - - - -
2.38 -4.44 0.06 -3.53 -2.61 -1.23 -4.59
2.48 -1.88 0.04 -3.19 - - -
Msp_g45328 (ORP4A)
 2.56 -3.78 -0.59 -4.72 -2.84 -3.13 -3.95
2.68 - -1.71 - - -2.74 -2.84
2.62 -4.27 -2.33 -3.33 -4.15 -2.56 -1.92
2.57 - 0.1 - - - -
Msp_g46857 (MEX1)
 2.51 -3.19 -0.13 -4.17 -3.28 -4.1 -4.39
Msp_g47759 (MYB16)
 2.35 -2.03 -0.38 -1.85 -4.02 -3.27 -1.19
2.6 -4.68 -0.15 - - -6.36 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.