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  5. Msp_g32305

Msp_g32305


Description : not classified & original description: none


Gene families : OG0004384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g32305
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT1G50450 No alias Saccharopine dehydrogenase 0.03 OrthoFinder output from all 47 species
Ala_g22231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10953 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0087.g042298 No alias not classified & original description: CDS=92-1492 0.04 OrthoFinder output from all 47 species
Cba_g17348 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.05G061700.1 Ceric.05G061700 not classified & original description: pacid=50577336... 0.03 OrthoFinder output from all 47 species
Dac_g11835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37543 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g02770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g04490.1 LOC_Os11g04490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g06068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_234238g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g21776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003593 No alias not classified & original description: CDS=1-1413 0.04 OrthoFinder output from all 47 species
Solyc11g065240.2.1 Solyc11g065240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e009193_P002 Zm00001e009193 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005097 Sacchrp_dh_NADP 47 171
No external refs found!