Msp_g31034 (ATCSLD5, CSLD5, SOS6)

Aliases : ATCSLD5, CSLD5, SOS6

Description : mannan synthase *(CSLD) & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g31034
Cluster	HCCA: Cluster_109

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00146460	IXR1, CEV1,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
AMTR_s00057p00116280	ATCSLD5, CSLD5,...	Cellulose synthase-like protein D5 OS=Arabidopsis thaliana	0.18	OrthoFinder output from all 47 species
AMTR_s00057p00116410	ATCSLD5, CSLD5,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.18	OrthoFinder output from all 47 species
AT1G02730	ATCSLD5, CSLD5, SOS6	cellulose synthase-like D5	0.17	OrthoFinder output from all 47 species
AT4G15290	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase family protein	0.02	OrthoFinder output from all 47 species
AT4G18780	CESA8, LEW2,...	cellulose synthase family protein	0.02	OrthoFinder output from all 47 species
AT5G17420	MUR10, ATCESA7,...	Cellulose synthase family protein	0.02	OrthoFinder output from all 47 species
AT5G44030	CESA4, NWS2, IRX5	cellulose synthase A4	0.03	OrthoFinder output from all 47 species
Adi_g117946	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g04374	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.09	OrthoFinder output from all 47 species
Als_g48740	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Als_g52588	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.06	OrthoFinder output from all 47 species
Aob_g27305	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aob_g28659	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aob_g30203	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aop_g09607	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.26	OrthoFinder output from all 47 species
Aspi01Gene58191.t1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aspi01Gene68876.t1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description: none	0.13	OrthoFinder output from all 47 species
Azfi_s0007.g010884	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Azfi_s0064.g035645	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ceric.21G060900.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.15	OrthoFinder output from all 47 species
Ceric.25G012000.1	AtCESA1, RSW1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Dac_g01048	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g27465	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
GSVIVT01021798001	CSLD1, ATCSLD1	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.02	OrthoFinder output from all 47 species
GSVIVT01028071001	ATCSLD5, CSLD5, SOS6	Cellulose synthase-like protein D5 OS=Arabidopsis thaliana	0.19	OrthoFinder output from all 47 species
GSVIVT01033297001	IXR1, CEV1,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
LOC_Os07g36630.1	ATCSLD5, CSLD5,...	D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
LOC_Os12g36890.1	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.07	OrthoFinder output from all 47 species
Len_g07988	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g14991	ATCSLD4, CSLD4	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g59359	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.09	OrthoFinder output from all 47 species
MA_60546g0010	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.11	OrthoFinder output from all 47 species
Nbi_g10118	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.21	OrthoFinder output from all 47 species
Ore_g44822	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g22229	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ppi_g30689	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005670	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Smo83878	ATCSLD3, KJK, CSLD3	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.07	OrthoFinder output from all 47 species
Solyc02g072240.3.1	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Solyc07g005840.2.1	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Solyc08g005280.2.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Solyc09g072820.4.1	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Solyc09g075550.3.1	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.07	OrthoFinder output from all 47 species
Spa_g38942	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.09	OrthoFinder output from all 47 species
Tin_g06669	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.18	OrthoFinder output from all 47 species
Zm00001e004630_P001	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e009570_P001	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Zm00001e009592_P002	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e009843_P002	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e019828_P001	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e031187_P001	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e033093_P003	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e034187_P001	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e037551_P002	CESA5, Zm00001e037551	catalytic component CesA of cellulose synthase complex	0.01	OrthoFinder output from all 47 species
Zm00001e039669_P001	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	331	1081

External Links

No external refs found!

Msp_g31034 (ATCSLD5, CSLD5, SOS6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation