Heatmap: Cluster_109 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Fertile Leaflet with Sori	Primary Rachis	Secondary Rachis	Petiole	Crozier	Rhizome	Root
Msp_g00154	-3.71	-	-	-	1.31	1.93	-0.69
Msp_g00748	0.06	-0.47	-0.52	-0.5	0.21	0.86	-0.23
Msp_g00894 (SGS3)	0.19	-0.65	-0.53	-0.72	0.3	0.78	-0.02
Msp_g01215	-0.24	-1.75	-2.19	-2.1	0.66	1.37	0.32
Msp_g01263 (NFD3)	-0.78	-	-7.43	-	0.96	1.92	-0.54
Msp_g01572	0.19	-1.15	-0.63	-1.04	0.49	0.88	0.06
Msp_g01981 (RAD51)	-0.03	-7.87	-5.07	-5.43	0.88	1.68	-0.1
Msp_g02664 (UBC20)	-0.6	-0.61	-0.92	-0.58	0.52	0.99	0.1
Msp_g03000 (FKBP15-2)	0.13	-0.65	-0.5	-0.64	0.23	0.82	-0.03
Msp_g03135 (AUR1)	-0.26	-8.09	-7.05	-8.2	0.56	1.89	-0.05
Msp_g03973	-1.49	-3.17	-3.38	-3.47	1.0	1.67	0.23
Msp_g04591	-1.48	-4.93	-5.14	-7.95	0.59	1.94	0.3
Msp_g05360 (CYCB2;3)	-0.42	-1.53	-0.96	-0.95	0.04	1.27	0.51
Msp_g05850	-0.73	-6.38	-6.44	-	0.96	1.74	0.11
Msp_g05916	0.17	-0.68	-0.38	-0.56	0.34	0.62	-0.0
Msp_g05992	-0.26	-2.97	-3.69	-2.82	0.89	1.51	0.15
Msp_g07159	-0.71	-4.6	-4.08	-4.27	1.03	1.69	-0.05
Msp_g07532	0.21	-1.96	-1.47	-1.48	0.61	1.27	-0.11
Msp_g07739	0.71	-3.66	-3.29	-4.08	0.43	1.46	0.04
Msp_g07779	-0.2	-4.87	-4.99	-4.89	0.52	1.64	0.56
Msp_g07854 (CYCB2;3)	-0.6	-3.72	-2.44	-3.63	0.99	1.53	0.17
Msp_g08358	0.03	-0.82	-0.51	-0.6	0.23	0.81	0.17
Msp_g08437	0.44	-3.23	-3.06	-2.43	0.43	1.67	-0.52
Msp_g08498 (CHMP1A)	-1.04	-5.2	-4.28	-5.14	0.94	1.79	0.05
Msp_g08773	0.14	-0.4	-0.39	-0.44	0.29	0.48	0.04
Msp_g09130 (PCNA1)	-0.22	-2.2	-2.01	-2.18	0.72	1.42	0.18
Msp_g09168	-0.51	-5.95	-7.61	-6.98	0.89	1.76	0.06
Msp_g09273	-1.21	-6.97	-7.65	-5.63	0.69	2.0	-0.14
Msp_g09791 (AUR1)	-0.6	-1.8	-2.33	-1.65	0.68	1.54	0.03
Msp_g09818 (HIS1-3)	0.27	-2.03	-1.89	-2.09	0.33	1.49	-0.02
Msp_g09966	-0.85	-	-3.78	-6.15	0.83	1.77	0.23
Msp_g10133	-1.81	-	-5.08	-	0.96	2.01	-0.5
Msp_g10135 (CYCA1;1)	-0.33	-8.47	-7.34	-6.21	0.59	1.88	0.0
Msp_g11191 (HTA3)	-0.34	-8.79	-	-	0.6	1.86	0.08
Msp_g11511 (TSO2)	-1.04	-	-	-	1.21	1.73	-0.19
Msp_g11528 (SYP124)	-1.46	-7.28	-7.48	-7.25	0.71	1.95	0.15
Msp_g11586 (CDC45)	-1.66	-	-	-	0.85	1.92	0.14
Msp_g11697 (CDKB1;2)	-2.56	-	-	-7.41	1.19	1.91	-0.34
Msp_g11767	-1.19	-7.2	-4.25	-7.27	1.31	1.72	-0.46
Msp_g12033	0.5	-4.65	-0.4	-5.36	0.35	1.41	-0.26
Msp_g12341 (SLD5)	0.1	-1.63	-1.06	-1.38	0.64	1.19	-0.16
Msp_g12560 (CYCA1;1)	-1.12	-8.66	-7.84	-8.82	0.72	1.91	0.16
Msp_g14003	-0.02	-1.62	-1.15	-1.68	0.39	1.23	0.35
Msp_g14117	0.6	-8.08	-	-	0.44	1.58	0.18
Msp_g14231	-0.93	-2.06	-2.16	-1.77	0.63	1.67	-0.03
Msp_g14467	-0.56	-3.62	-4.56	-4.86	0.69	1.75	0.24
Msp_g14469 (ATSMC2)	-0.95	-3.07	-3.68	-2.67	0.79	1.7	0.21
Msp_g14482	0.66	-4.38	-3.97	-3.96	0.88	1.52	-0.91
Msp_g14571	0.05	-7.14	-8.03	-7.94	0.63	1.65	0.33
Msp_g14695 (FU)	0.25	-1.32	-1.25	-1.57	0.59	1.2	-0.23
Msp_g14731	0.07	-7.24	-7.31	-6.8	0.34	1.67	0.57
Msp_g14843 (HIK)	-0.91	-1.94	-2.6	-1.71	0.51	1.64	0.25
Msp_g14974	-1.2	-3.4	-2.94	-2.8	0.46	1.79	0.44
Msp_g15009 (SDG4)	-0.13	-0.68	-0.52	-0.68	0.35	0.89	0.01
Msp_g15063	-0.07	-2.39	-3.03	-2.33	0.69	1.56	-0.04
Msp_g15201	-0.33	-2.66	-3.08	-2.73	0.87	1.61	-0.16
Msp_g15513	0.42	-0.94	-0.76	-0.94	0.48	0.86	-0.3
Msp_g15599	0.24	-0.78	-0.33	-0.56	0.31	0.71	-0.19
Msp_g15665 (DEL1)	-1.26	-6.92	-7.82	-7.02	0.81	1.92	0.02
Msp_g15670	-0.69	-6.68	-4.93	-6.68	0.68	1.85	0.14
Msp_g15829 (ROW1)	-0.72	-5.38	-7.9	-6.81	0.92	1.79	0.02
Msp_g15997 (R1)	-0.64	-4.23	-3.92	-4.4	0.95	1.69	0.06
Msp_g16003	-0.75	-1.43	-1.51	-1.12	0.71	1.39	-0.05
Msp_g16020 (NP1)	-0.57	-1.46	-1.32	-1.39	0.61	1.27	0.3
Msp_g18020	-0.8	-2.84	-3.73	-2.95	0.99	1.81	-0.8
Msp_g18254 (LACS6)	0.4	-1.96	-1.05	-1.8	0.68	1.29	-0.72
Msp_g20091	-0.48	-1.81	-1.69	-1.4	0.53	1.42	0.26
Msp_g20543 (MYB3R-5)	-0.04	-1.27	-1.37	-0.73	0.35	1.15	0.16
Msp_g21114 (CYCB2;3)	0.21	-1.16	-0.73	-0.97	0.32	1.01	0.03
Msp_g23540	-0.38	-3.66	-2.76	-6.0	0.69	1.81	-0.21
Msp_g28682	0.18	-	-	-3.16	0.16	1.67	0.54
Msp_g29472	-	-	-	-	1.08	2.03	-0.32
Msp_g29485 (HTA3)	-0.7	-	-	-	0.59	1.93	0.11
Msp_g31034 (SOS6)	-0.17	-	-	-	0.52	1.8	0.25
Msp_g31210 (NFB2)	-0.07	-4.12	-2.61	-4.17	0.9	1.57	-0.08
Msp_g31445 (EMB2656)	-0.56	-4.97	-4.44	-3.88	0.67	1.75	0.29
Msp_g31552 (CYCA1;1)	0.26	-2.42	-2.51	-2.63	0.84	1.45	-0.38
Msp_g31655 (ATK1)	-1.15	-3.66	-3.63	-3.45	0.7	1.9	-0.07
Msp_g31815	-0.1	-2.91	-4.28	-3.39	1.03	1.39	0.16
Msp_g31942 (DRP5A)	-0.51	-2.11	-2.13	-2.61	0.61	1.6	0.16
Msp_g32088 (SMC3)	-0.95	-4.59	-4.73	-4.44	0.85	1.8	0.11
Msp_g32196	-0.63	-4.1	-3.53	-3.87	0.63	1.88	-0.13
Msp_g32278 (MAP65-1)	-0.65	-8.58	-6.91	-7.7	0.55	1.81	0.46
Msp_g32341 (IQD6)	-1.2	-	-	-8.33	0.9	1.95	-0.26
Msp_g32426 (FRA1)	-0.03	-3.0	-2.47	-2.54	0.29	1.45	0.67
Msp_g32599	-1.25	-5.0	-4.57	-4.66	1.0	1.7	0.28
Msp_g32959	0.07	-5.69	-	-	0.94	1.51	0.22
Msp_g37198 (TOPII)	-0.13	-3.73	-3.97	-3.79	0.6	1.75	0.01
Msp_g38054	-0.54	-	-6.98	-	0.48	1.9	0.24
Msp_g38088	-1.33	-5.62	-5.48	-5.3	0.77	1.83	0.33
Msp_g38295 (KP1)	-0.27	-3.57	-1.18	-2.94	0.5	1.57	0.18
Msp_g38531 (HMGB6)	-0.57	-9.48	-7.82	-	0.96	1.79	-0.11
Msp_g38961	-0.27	-0.92	-0.71	-0.8	0.16	1.24	-0.03
Msp_g41988	-1.37	-	-	-	1.08	1.81	-0.0
Msp_g42139	-1.55	-	-4.23	-5.59	0.72	1.94	0.13
Msp_g42629 (TSO2)	-0.2	-	-	-	0.76	1.77	0.05
Msp_g42691	-0.6	-3.53	-2.96	-2.97	0.67	1.65	0.35
Msp_g42845	-0.3	-5.56	-4.02	-3.17	0.78	1.46	0.62
Msp_g42899 (CYCB2;4)	-0.97	-5.17	-5.02	-7.29	0.7	1.84	0.29
Msp_g44431 (HIK)	-0.63	-2.56	-2.66	-2.32	0.53	1.64	0.34
Msp_g46524	0.12	-0.41	-0.45	-0.46	0.32	0.62	-0.12
Msp_g47000 (CDKB1;2)	-0.63	-6.11	-5.44	-6.23	0.55	1.81	0.4
Msp_g48508	0.13	-2.44	-2.49	-2.78	0.75	1.52	-0.22

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.