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  5. Msp_g26427

Msp_g26427


Description : not classified & original description: none


Gene families : OG0002693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g26427
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Als_g05420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00369.t1 Aspi01Gene00369 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0198.g057435 No alias not classified & original description: CDS=75-2141 0.03 OrthoFinder output from all 47 species
Ceric.22G007400.1 Ceric.22G007400 not classified & original description: pacid=50614788... 0.03 OrthoFinder output from all 47 species
Lfl_g08834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g35592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000061 Surp 55 102
No external refs found!