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  5. Msp_g15814

Msp_g15814


Description : subunit beta of cargo adaptor F-subcomplex & original description: none


Gene families : OG0002649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15814
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00238440 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AT4G31480 No alias Coatomer, beta subunit 0.06 OrthoFinder output from all 47 species
AT4G31490 No alias Coatomer, beta subunit 0.06 OrthoFinder output from all 47 species
Adi_g005793 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Adi_g059782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08571 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Ala_g12957 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Als_g16565 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Als_g27352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50512 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Aob_g05342 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Aop_g08029 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0279.g062259 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G093900.1 Ceric.04G093900 subunit beta of cargo adaptor F-subcomplex & original... 0.09 OrthoFinder output from all 47 species
Ceric.24G063400.1 Ceric.24G063400 subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.156 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Cre04.g217921 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
Dcu_g03132 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08642 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01035511001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 OrthoFinder output from all 47 species
Gb_03760 No alias subunit beta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Gb_23100 No alias subunit beta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
LOC_Os01g17430.1 LOC_Os01g17430 subunit beta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
LOC_Os11g07280.1 LOC_Os11g07280 subunit beta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Len_g12104 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Lfl_g04220 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
MA_10431517g0010 No alias subunit beta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
MA_10432097g0010 No alias Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_10432097g0020 No alias subunit beta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
MA_704359g0010 No alias Coatomer subunit beta-1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g08450.1 No alias subunit beta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Nbi_g02428 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.09 OrthoFinder output from all 47 species
Ore_g17455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30253 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Pir_g02305 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g17439 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Smo160340 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 OrthoFinder output from all 47 species
Solyc01g007150.3.1 Solyc01g007150 subunit beta of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species
Solyc10g081920.2.1 Solyc10g081920 subunit beta of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species
Spa_g12851 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Spa_g56532 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Tin_g04740 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e009041_P001 Zm00001e009041 subunit beta of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Zm00001e017416_P001 Zm00001e017416 subunit beta of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Zm00001e025465_P001 Zm00001e025465 subunit beta of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR029446 COPB1_appendage_platform_dom 824 951
IPR011710 Coatomer_bsu_C 680 818
IPR002553 Clathrin/coatomer_adapt-like_N 23 482
No external refs found!