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  5. Msp_g13981

Msp_g13981 (EMB2771)


Aliases : EMB2771

Description : component *(APC1) of (APC/C)-dependent ubiquitination platform subcomplex & original description: none


Gene families : OG0006432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006432_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13981

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00148280 EMB2771,... Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.02 OrthoFinder output from all 47 species
AT5G05560 EMB2771 E3 ubiquitin ligase, putative 0.06 OrthoFinder output from all 47 species
Als_g17485 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.06 OrthoFinder output from all 47 species
Azfi_s0130.g049023 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Ceric.30G071400.1 EMB2771, Ceric.30G071400 component *(APC1) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Dac_g12112 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Dcu_g12987 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.05 OrthoFinder output from all 47 species
Gb_37425 EMB2771 component APC1 of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Len_g11449 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010034 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005680 anaphase-promoting complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR041221 APC1_C 1584 1759
IPR024990 Apc1 101 251
IPR046794 Apc1_MidN 706 767
IPR046794 Apc1_MidN 509 618
No external refs found!