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  5. Msp_g10026

Msp_g10026


Description : not classified & original description: none


Gene families : OG0002397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10026

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00239070 PMZ, SAP12,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
Ala_g37949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g29975 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g40601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27980.t2 Aspi01Gene27980 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54444.t1 Aspi01Gene54444 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0027.g023672 PMZ, SAP12 not classified & original description: CDS=182-766 0.03 OrthoFinder output from all 47 species
Ceric.17G055100.1 PMZ, SAP12,... not classified & original description: pacid=50618072... 0.04 OrthoFinder output from all 47 species
Dac_g10488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032538001 PMZ, SAP12 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01033300001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 OrthoFinder output from all 47 species
Gb_16838 No alias C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
LOC_Os09g21710.1 PMZ, SAP12,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g20576 PMZ, SAP12 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g17252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_141733g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_158847g0010 PMZ, SAP12 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Pir_g12360 PMZ, SAP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g087210.3.1 PMZ, SAP12,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Spa_g17575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 173 211
IPR000058 Znf_AN1 85 122
No external refs found!