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  5. Msp_g09819

Msp_g09819


Description : regulatory protein *(ROQH1) of non-photochemical quenching & original description: none


Gene families : OG0005983 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09819
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT4G31530 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.07 OrthoFinder output from all 47 species
Aob_g15901 No alias regulatory protein *(ROQH1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030415 No alias regulatory protein *(ROQH1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Cba_g25947 No alias regulatory protein *(ROQH1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000796.24 No alias No description available 0.04 OrthoFinder output from all 47 species
Dac_g21767 No alias regulatory protein *(ROQH1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Dcu_g39976 No alias regulatory protein *(ROQH1) of non-photochemical... 0.08 OrthoFinder output from all 47 species
Dde_g02054 No alias regulatory protein *(ROQH1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
GSVIVT01037232001 No alias Uncharacterized protein At2g37660, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g01467 No alias regulatory protein *(ROQH1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Mp1g09850.1 No alias Uncharacterized protein At2g37660, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g26502 No alias regulatory protein *(ROQH1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Pir_g07945 No alias regulatory protein *(ROQH1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Sam_g50671 No alias regulatory protein *(ROQH1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Solyc01g008920.4.1 Solyc01g008920 Uncharacterized protein At2g37660, chloroplastic... 0.03 OrthoFinder output from all 47 species
Tin_g28985 No alias regulatory protein *(ROQH1) of non-photochemical... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 110 318
No external refs found!