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  5. Msp_g07609

Msp_g07609


Description : mRNA endoribonuclease *(G3BP) & original description: none


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07609

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00228400 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G60980 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.02 OrthoFinder output from all 47 species
Adi_g010072 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036227 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079968 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25747 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02233 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05128 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.14 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre02.g092400 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g00907 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003923001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g03890.1 LOC_Os02g03890 mRNA endoribonuclease (G3BP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g30430.1 LOC_Os04g30430 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g43150.2 LOC_Os04g43150 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
MA_10429469g0010 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Solyc06g083730.3.1 Solyc06g083730 mRNA endoribonuclease (G3BP) 0.04 OrthoFinder output from all 47 species
Zm00001e022613_P001 Zm00001e022613 mRNA endoribonuclease (G3BP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002075 NTF2_dom 21 139
IPR000504 RRM_dom 328 393
No external refs found!