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  5. Msp_g07255

Msp_g07255


Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0006141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07255
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00234060 evm_27.TU.AmTr_v1... Photosynthesis.photorespiration.glycine cleavage... 0.04 OrthoFinder output from all 47 species
AT1G11860 No alias Glycine cleavage T-protein family 0.03 OrthoFinder output from all 47 species
Adi_g012258 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aev_g00995 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ala_g01769 No alias EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Als_g02383 No alias EC_2.1 transferase transferring one-carbon group &... 0.07 OrthoFinder output from all 47 species
Aob_g01410 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aop_g00543 No alias EC_2.1 transferase transferring one-carbon group &... 0.08 OrthoFinder output from all 47 species
Azfi_s0054.g033810 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ceric.22G062500.1 Ceric.22G062500 EC_2.1 transferase transferring one-carbon group &... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000350.8 No alias Photosynthesis.photorespiration.glycine cleavage... 0.02 OrthoFinder output from all 47 species
Dac_g07307 No alias EC_2.1 transferase transferring one-carbon group &... 0.07 OrthoFinder output from all 47 species
Dcu_g11190 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Dde_g24052 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ehy_g00880 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
GSVIVT01012702001 No alias Photosynthesis.photorespiration.glycine cleavage... 0.05 OrthoFinder output from all 47 species
Gb_29854 No alias aminomethyltransferase component T-protein of glycine... 0.03 OrthoFinder output from all 47 species
LOC_Os04g53230.1 LOC_Os04g53230 aminomethyltransferase component T-protein of glycine... 0.03 OrthoFinder output from all 47 species
Lfl_g03312 No alias EC_2.1 transferase transferring one-carbon group &... 0.07 OrthoFinder output from all 47 species
Mp2g09990.1 No alias aminomethyltransferase component T-protein of glycine... 0.04 OrthoFinder output from all 47 species
Nbi_g13755 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ppi_g28971 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021879 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Sam_g10834 No alias EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Sam_g27330 No alias EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Smo272095 No alias Photosynthesis.photorespiration.glycine cleavage... 0.02 OrthoFinder output from all 47 species
Solyc02g080810.3.1 Solyc02g080810 aminomethyltransferase component T-protein of glycine... 0.04 OrthoFinder output from all 47 species
Spa_g05364 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Tin_g05968 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR006222 GCV_T_N 50 305
IPR013977 GCV_T_C 332 409
No external refs found!