Description : EC_4.1 carbon-carbon lyase & original description: none
Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Msp_g05404 | |
Cluster | HCCA: Cluster_47 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00011p00266060 | SAMDC,... | Polyamine... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00019p00109640 | SAMDC,... | Polyamine... | 0.04 | OrthoFinder output from all 47 species | |
Als_g04281 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g10247 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g38176 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g62652 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Cba_g15212 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_37304 | No alias | ornithine decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
Gb_37305 | No alias | ornithine decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g37120.1 | LOC_Os09g37120 | ornithine decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g25624 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_2649g0010 | SAMDC | S-adenosyl methionine decarboxylase | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g10143 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g080380.4.1 | SAMDC4, BUD2,... | S-adenosyl methionine decarboxylase | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g082030.1.1 | Solyc04g082030 | ornithine decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
Spa_g17277 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g05489 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041156_P001 | Zm00001e041156 | S-adenosyl methionine decarboxylase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEA | Interproscan |
BP | GO:0006597 | spermine biosynthetic process | IEA | Interproscan |
BP | GO:0008295 | spermidine biosynthetic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001985 | S-AdoMet_decarboxylase | 5 | 331 |
No external refs found! |