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Aliases : RAD51, ATRAD51
Description : component *(RAD51) of BRCC regulatory deubiquination complex & original description: none
Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g01981 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G20850 | RAD51, ATRAD51 | RAS associated with diabetes protein 51 | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g23150 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.23 | OrthoFinder output from all 47 species | |
| Als_g52823 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.1 | OrthoFinder output from all 47 species | |
| Aspi01Gene65488.t1 | RAD51, ATRAD51,... | component *(RAD51) of BRCC regulatory deubiquination... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g026051 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.01G082000.1 | RAD51, ATRAD51,... | component *(RAD51) of BRCC regulatory deubiquination... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.17G014900.1 | XRCC3, ATXRCC3,... | component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g278151 | XRCC3, ATXRCC3 | DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g00622 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.18 | OrthoFinder output from all 47 species | |
| Dcu_g00814 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01015002001 | RAD51, ATRAD51 | DNA damage response.BRCC DNA-damage response... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_14443 | RAD51, ATRAD51 | DNA repair protein RAD51 homolog OS=Solanum lycopersicum... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g40150.1 | RAD51, ATRAD51,... | component RAD51 of BRCC DNA-damage response complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g31370.1 | RAD51, ATRAD51,... | component RAD51 of BRCC DNA-damage response complex | 0.05 | OrthoFinder output from all 47 species | |
| Len_g09185 | XRCC3, ATXRCC3 | component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g11468 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g59568 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.09 | OrthoFinder output from all 47 species | |
| Lfl_g17235 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.08 | OrthoFinder output from all 47 species | |
| MA_93267g0010 | RAD51, ATRAD51 | DNA repair protein RAD51 homolog 1 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| MA_93267g0020 | RAD51, ATRAD51 | DNA repair protein RAD51 homolog 1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Mp3g22920.1 | RAD51, ATRAD51 | component RAD51 of BRCC DNA-damage response complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g15410.1 | XRCC3, ATXRCC3 | component XRCC3 of RAD51c-XRCC3 accessory DSB repair heterodimer | 0.15 | OrthoFinder output from all 47 species | |
| Nbi_g04179 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.12 | OrthoFinder output from all 47 species | |
| Nbi_g08435 | XRCC3, ATXRCC3 | component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29670 | RAD51, ATRAD51 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g32787 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g02833 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000652 | ARLIM15, DMC1, ATDMC1 | not classified & original description: CDS=1-1248 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007848 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0118.g021196 | XRCC3, ATXRCC3 | component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g017540.4.1 | RAD51, ATRAD51,... | component RAD51 of BRCC DNA-damage response complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g38367 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.12 | OrthoFinder output from all 47 species | |
| Tin_g05894 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.13 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013632 | DNA_recomb/repair_Rad51_C | 84 | 336 |
| No external refs found! |