Aliases : VPS35B
Description : component *(VPS35) of Retromer protein recycling complex & original description: none
Gene families : OG0003496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003496_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Msp_g00699 | |
Cluster | HCCA: Cluster_168 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G17790 | ZIP3, VPS35A | VPS35 homolog A | 0.06 | OrthoFinder output from all 47 species | |
Ala_g07415 | VPS35B | component *(VPS35) of Retromer protein recycling complex... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g01821 | VPS35B | component *(VPS35) of Retromer protein recycling complex... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.32G026000.1 | VPS35B, Ceric.32G026000 | component *(VPS35) of Retromer protein recycling complex... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g44008 | VPS35B | component *(VPS35) of Retromer protein recycling complex... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os03g58700.1 | VPS35B, LOC_Os03g58700 | component VPS35 of Retromer protein recycling complex | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g11981 | VPS35B | component *(VPS35) of Retromer protein recycling complex... | 0.09 | OrthoFinder output from all 47 species | |
Solyc02g083560.3.1 | ZIP3, VPS35A,... | component VPS35 of Retromer protein recycling complex | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006031_P002 | VPS35B, Zm00001e006031 | component VPS35 of Retromer protein recycling complex | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e011849_P003 | VPS35B, Zm00001e011849 | component VPS35 of Retromer protein recycling complex | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015031 | protein transport | IEA | Interproscan |
CC | GO:0030906 | retromer, cargo-selective complex | IEA | Interproscan |
BP | GO:0042147 | retrograde transport, endosome to Golgi | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005777 | peroxisome | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
CC | GO:0042579 | microbody | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005378 | Vps35 | 18 | 754 |
No external refs found! |