Heatmap: Cluster_168 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
Msp_g00663 (PRHA)
-0.07 -0.47 -0.38 -0.39 0.12 0.7 0.12
Msp_g00699 (VPS35B)
-0.12 -0.26 -0.3 -0.2 0.13 0.47 0.11
-0.89 -0.89 -1.56 -0.81 0.55 1.15 0.42
-0.3 -0.41 -0.49 -0.37 0.22 0.86 -0.05
Msp_g01222 (SHD)
-0.17 -0.63 -0.89 -0.55 0.26 0.88 0.26
-0.3 -0.7 -0.89 -0.57 0.14 1.09 0.16
-0.28 -0.48 -0.54 -0.46 0.22 0.89 0.03
Msp_g01603 (TUBG1)
-0.22 -0.38 -0.46 -0.21 0.29 0.68 -0.05
-0.15 -0.4 -0.44 -0.33 0.2 0.7 0.05
-0.2 -0.34 -0.55 -0.33 0.26 0.69 0.06
-1.77 -1.95 -2.01 -2.0 0.5 1.71 0.34
-1.79 -4.33 -4.38 -3.34 1.05 1.62 0.45
-0.23 -0.82 -0.91 -0.71 0.37 1.11 -0.03
-0.16 -0.65 -0.72 -0.47 0.3 0.88 0.08
Msp_g03130 (UXS5)
-0.48 -2.17 -1.69 -2.06 0.3 1.64 0.21
Msp_g04378 (GAMMA CAL2)
-0.27 -0.3 -0.57 -0.39 0.17 0.7 0.23
-2.07 -0.88 -2.43 -0.78 0.39 1.48 0.44
-0.13 -0.45 -0.37 -0.4 0.24 0.71 0.0
-0.06 -0.3 -0.28 -0.18 0.1 0.51 0.04
-1.95 -4.02 -3.8 -4.02 0.97 1.5 0.82
Msp_g04913 (FT1)
-0.62 -5.46 -6.36 -7.55 0.87 1.78 0.09
Msp_g04982 (GRF12)
-0.24 -0.42 -0.74 -0.33 0.21 0.89 0.02
-0.35 -0.5 -0.51 -0.42 0.46 0.68 0.12
Msp_g05037 (NPSN13)
-0.45 -1.22 -1.44 -1.35 0.42 1.3 0.34
-4.1 - - - 0.48 2.11 0.31
-1.15 -0.88 -1.14 -0.62 0.16 1.47 0.01
-1.91 -1.98 -3.1 -1.33 0.55 1.79 0.06
Msp_g05423 (TOM2A)
-0.74 -0.66 -0.87 -0.51 0.4 1.06 0.17
Msp_g05615 (MTHFR2)
-0.6 -0.43 -0.64 -0.27 0.25 0.97 -0.03
-0.29 -3.74 -2.36 -3.92 0.35 1.76 0.25
-0.38 -0.73 -0.9 -0.61 0.16 1.05 0.32
Msp_g06252 (GATA12)
-1.35 - - -3.31 0.51 2.03 0.02
-0.23 -0.46 -0.39 -0.36 0.37 0.52 0.21
-0.37 -0.41 -0.52 -0.39 0.47 0.63 0.13
-1.62 -5.15 - - 0.93 1.71 0.56
-1.1 -1.67 -2.02 -1.82 0.78 1.33 0.54
-0.51 -1.01 -1.08 -0.88 0.28 1.16 0.41
Msp_g10007 (UER1)
-0.26 -1.65 -1.07 -1.56 0.29 1.44 0.12
Msp_g10222 (ACT7)
-0.74 -0.78 -1.08 -0.65 0.36 1.07 0.41
Msp_g10714 (PI4K GAMMA 4)
-0.23 -0.25 -0.49 -0.26 0.18 0.69 0.01
-0.45 -0.82 -1.06 -0.75 0.55 1.0 0.21
Msp_g11436 (sks5)
-2.22 - -11.51 -10.55 0.71 1.97 0.31
Msp_g11535 (TMN7)
-0.21 -0.35 -0.4 -0.27 0.15 0.77 -0.07
Msp_g12119 (KINESIN-13A)
-0.6 -1.01 -1.04 -0.85 0.47 1.29 -0.04
-2.61 -3.3 -3.49 -3.17 0.97 1.54 0.73
Msp_g12777 (FLA12)
-3.99 -6.78 -8.59 -6.79 1.0 1.67 0.8
-1.1 -4.22 -5.38 -3.49 1.02 1.57 0.46
-2.68 -4.83 -5.0 -6.49 0.96 1.81 0.4
Msp_g15333 (ADH2)
-0.26 -0.52 -0.64 -0.42 0.24 0.86 0.12
-1.43 -1.25 -1.4 -1.0 0.26 1.44 0.51
-0.46 -8.01 -8.17 -7.53 0.48 1.87 0.27
-0.95 -1.03 -0.79 -0.83 0.63 1.0 0.37
Msp_g17702 (UCC1)
-1.27 -2.2 -2.92 -0.93 0.33 1.73 0.2
-1.11 -0.97 -1.19 -0.83 0.63 1.19 0.25
-3.2 -6.92 -6.45 -4.17 1.26 1.64 0.39
-3.1 -6.74 -6.2 -4.44 1.23 1.58 0.56
Msp_g20906 (ARFA1B)
-1.31 -1.17 -1.65 -0.84 0.34 1.33 0.58
-0.71 -0.79 -0.84 -0.69 0.43 1.1 0.19
-0.24 -0.88 -0.87 -0.65 0.36 0.98 0.24
-0.41 -1.41 -1.29 -1.65 0.56 1.46 -0.12
-0.81 -0.79 -1.02 -0.68 0.41 1.1 0.32
Msp_g25716 (PSAT)
-0.51 -0.59 -0.94 -0.39 0.33 1.06 0.0
Msp_g26578 (SAD2)
-0.16 -0.37 -0.32 -0.24 0.24 0.6 -0.02
-0.28 -1.15 -1.07 -0.74 0.67 1.02 0.04
-0.42 -2.9 -4.02 -4.73 0.42 1.61 0.7
Msp_g31624 (TCX2)
-1.96 -3.45 -2.75 -3.31 0.8 1.67 0.56
-0.52 -4.86 -3.45 -4.46 0.24 1.74 0.7
-1.52 -6.03 -7.59 -6.19 1.03 1.63 0.57
-1.14 -1.77 -1.95 -1.55 0.94 1.18 0.56
-0.4 -3.33 -3.54 -3.62 0.65 1.87 -0.42
-0.3 -0.33 -0.51 -0.31 0.27 0.59 0.24
Msp_g37362 (TPK1)
-0.61 -1.24 -2.05 -0.75 0.79 1.12 0.23
-0.36 -1.7 -1.95 -1.71 0.22 1.51 0.42
-5.55 -7.89 -5.26 - 0.86 1.98 0.25
-1.24 -2.07 -3.3 -2.08 0.93 1.45 0.46
Msp_g48689 (ZEU1)
-0.67 -0.64 -0.71 -0.74 0.24 1.04 0.35
Msp_g48895 (PDI4)
-0.47 -0.81 -0.65 -0.68 0.53 0.81 0.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.