1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g00408

Msp_g00408


Description : plastidial ribosome hibernation-promoting factor *(PSRP1) & original description: none


Gene families : OG0004521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004521_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g00408
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT5G24490 No alias 30S ribosomal protein, putative 0.03 OrthoFinder output from all 47 species
Aop_g12220 No alias plastidial ribosome hibernation-promoting factor... 0.03 OrthoFinder output from all 47 species
Cba_g08190 No alias plastidial ribosome hibernation-promoting factor... 0.05 OrthoFinder output from all 47 species
Ehy_g01192 No alias plastidial ribosome hibernation-promoting factor... 0.12 OrthoFinder output from all 47 species
Gb_00693 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.04 OrthoFinder output from all 47 species
Ore_g30023 No alias plastidial ribosome hibernation-promoting factor... 0.05 OrthoFinder output from all 47 species
Pir_g00350 No alias plastidial ribosome hibernation-promoting factor... 0.04 OrthoFinder output from all 47 species
Ppi_g06824 No alias plastidial ribosome hibernation-promoting factor... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0044238 primary metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR032528 Ribosom_S30AE_C 222 276
IPR003489 RHF/RaiA 93 189
No external refs found!