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  5. Tin_g45791

Tin_g45791


Description : not classified & original description: none


Gene families : OG0000447 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000447_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45791
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT3G26440 No alias Protein of unknown function (DUF707) 0.03 OrthoFinder output from all 47 species
Cba_g05813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005833001 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_10436676g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g103170.4.1 Solyc01g103170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g078820.3.1 Solyc02g078820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g093470.4.1 Solyc02g093470 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007877 DUF707 140 424
No external refs found!