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  5. Tin_g42711

Tin_g42711


Description : not classified & original description: none


Gene families : OG0000178 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g42711

Target Alias Description ECC score Gene Family Method Actions
Dde_g19166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g15579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57766 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g11636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26530 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g36124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!