Tin_g22572


Description : not classified & original description: none


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g22572
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Adi_g016484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016985 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25751.t1 ORF120, Aspi01Gene25751 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50570.t1 Aspi01Gene50570 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55041.t1 Aspi01Gene55041 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61478.t1 ORF145A, Aspi01Gene61478 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72777.t1 Aspi01Gene72777 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g48953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g56397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g33365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c26_13990V3.1 Pp3c26_13990 Polynucleotidyl transferase, ribonuclease H-like... 0.01 OrthoFinder output from all 47 species
Pp3c3_24330V3.1 Pp3c3_24330 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c8_9221V3.1 Pp3c8_9221 No annotation 0.01 OrthoFinder output from all 47 species
Sam_g32107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!