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Description : component *(NOT10) of mRNA deadenylation CCR4-NOT complex & original description: none
Gene families : OG0004355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004355_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g22557 | |
| Cluster | HCCA: Cluster_73 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00046p00133890 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04025 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13296 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g18977 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08264 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36944 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.23G060100.1 | Ceric.23G060100 | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g01772 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g33198 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g14129 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015594001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g03600.1 | LOC_Os09g03600 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16359 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g13190 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08378 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g007890.3.1 | Solyc07g007890 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g30412 | No alias | component *(NOT10) of mRNA deadenylation CCR4-NOT... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009419_P004 | Zm00001e009419 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e033607_P001 | Zm00001e033607 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |