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  5. Tin_g21695

Tin_g21695 (emb1579)


Aliases : emb1579

Description : not classified & original description: none


Gene families : OG0003544 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21695

Target Alias Description ECC score Gene Family Method Actions
AT2G03150 emb1579 ATP/GTP-binding protein family 0.02 OrthoFinder output from all 47 species
Aob_g12039 emb1579 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21996 emb1579 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G096000.1 emb1579, Ceric.12G096000 not classified & original description: pacid=50600642... 0.04 OrthoFinder output from all 47 species
Ehy_g07959 emb1579 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14277 emb1579 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06811 emb1579 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g008680.4.1 emb1579, Solyc04g008680 no description available(sp|f4is91|rsa1_arath : 275.0) 0.02 OrthoFinder output from all 47 species
Zm00001e030655_P003 emb1579, Zm00001e030655 no description available(sp|f4is91|rsa1_arath : 304.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR025954 DBC1/CARP1_inactive_NUDIX_dom 524 640
IPR045354 BURAN 418 503
IPR045353 LAIKA 825 882
No external refs found!