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  5. Tin_g20947

Tin_g20947


Description : not classified & original description: none


Gene families : OG0004851 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20947
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Aob_g05448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22244 ATCAD7, CAD7,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Cba_g22344 ELI3-2, ATCAD8,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g23127 ATCAD7, CAD7,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.09 OrthoFinder output from all 47 species
Cba_g37556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78128 CAD5, ATCAD5, CAD-5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03042 ATCAD7, CAD7,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Tin_g21430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR013149 ADH-like_C 191 313
IPR013154 ADH-like_N 37 143
No external refs found!