Aliases : RPN10, MCB1, ATMCB1, MBP1
Description : regulatory component *(RPN10) of 26S proteasome & original description: none
Gene families : OG0003945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003945_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g15557 | |
Cluster | HCCA: Cluster_140 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G38630 | RPN10, MCB1, ATMCB1, MBP1 | regulatory particle non-ATPase 10 | 0.09 | OrthoFinder output from all 47 species | |
Aev_g13761 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.07 | OrthoFinder output from all 47 species | |
Aop_g00617 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0570.g077842 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.06 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000829.9 | RPN10, MCB1, ATMCB1, MBP1 | Protein degradation.26S proteasome.regulatory... | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g663500 | RPN10, MCB1, ATMCB1, MBP1 | Protein degradation.26S proteasome.regulatory... | 0.12 | OrthoFinder output from all 47 species | |
Dcu_g03823 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.07 | OrthoFinder output from all 47 species | |
Gb_32026 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component RPN10 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g13970.1 | RPN10, MCB1,... | regulatory component RPN10 of 26S proteasome | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g02845 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Mp5g18070.1 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component RPN10 of 26S proteasome | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g04703 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.05 | OrthoFinder output from all 47 species | |
Pp3c6_20680V3.1 | RPN10, MCB1,... | regulatory particle non-ATPase 10 | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g04452 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g50118 | No alias | regulatory component *(RPN10) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Smo170931 | RPN10, MCB1, ATMCB1, MBP1 | Protein degradation.26S proteasome.regulatory... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g15022 | RPN10, MCB1, ATMCB1, MBP1 | regulatory component *(RPN10) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001011_P001 | RPN10, MCB1,... | regulatory component RPN10 of 26S proteasome | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e038598_P003 | RPN10, MCB1,... | regulatory component RPN10 of 26S proteasome | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004827 | proline-tRNA ligase activity | IEP | HCCA |
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0007264 | small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
No external refs found! |