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  5. Tin_g15178

Tin_g15178 (YSL6)


Aliases : YSL6

Description : ferric cation-chelator transporter *(YSL) & original description: none


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00064240 YSL6,... Probable metal-nicotianamine transporter YSL6... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00064710 YSL4,... Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.02 OrthoFinder output from all 47 species
AT5G24380 ATYSL2, YSL2 YELLOW STRIPE like 2 0.02 OrthoFinder output from all 47 species
Als_g20697 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Gb_40333 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
MA_10431747g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.02 OrthoFinder output from all 47 species
MA_508161g0010 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Pir_g52007 YSL6 iron chelator transporter *(YSL) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11994 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026300 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g22236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 81 699
No external refs found!