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  5. Tin_g13498

Tin_g13498


Description : not classified & original description: none


Gene families : OG0001105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13498
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Ala_g10519 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g21674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03315 FMO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21179 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36682.t1 Aspi01Gene36682 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63664.t1 Aspi01Gene63664 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G041100.1 Ceric.34G041100 not classified & original description: pacid=50624168... 0.03 OrthoFinder output from all 47 species
Dac_g20784 No alias flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Dde_g23621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29722 YUC11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03219 YUC11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32829 YUC10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45914 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g63384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo178716 No alias Probable indole-3-pyruvate monooxygenase YUCCA5... 0.03 OrthoFinder output from all 47 species
Spa_g17558 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g21969 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!