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  5. Tin_g12864

Tin_g12864 (UBC16)


Aliases : UBC16

Description : E2 ubiquiTin-conjugaTing enzyme *(UBC15) & original description: none


Gene families : OG0001468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12864
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Adi_g013603 UBC15, ATUBC2-1 E2 ubiquitin-conjugating enzyme *(UBC15) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000781 UBC16 E2 ubiquitin-conjugating enzyme *(UBC15) & original... 0.03 OrthoFinder output from all 47 species
Ceric.36G050900.1 UBC16, Ceric.36G050900 E2 ubiquitin-conjugating enzyme *(UBC15) & original... 0.03 OrthoFinder output from all 47 species
Mp1g00400.1 UBC16 Probable ubiquitin-conjugating enzyme E2 16... 0.02 OrthoFinder output from all 47 species
Ore_g06318 UBC16 E2 ubiquitin-conjugating enzyme *(UBC15) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e003346_P001 UBC15, ATUBC2-1,... Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 49 183
No external refs found!