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  5. Tin_g12733

Tin_g12733 (RGTB1, AtRGTB1)


Aliases : RGTB1, AtRGTB1

Description : subunit beta of RAB-GTPase geranylgeranyltransferase (RGT) complex & original description: none


Gene families : OG0005037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12733
Cluster HCCA: Cluster_138


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 196 238
IPR001330 PFTB_repeat 51 93
IPR001330 PFTB_repeat 243 286
IPR001330 PFTB_repeat 99 141
IPR001330 PFTB_repeat 147 190
No external refs found!